SubgroupSmoker 12 Weeks P2...1	SubgroupSmoker 12 Weeks P2...2	SubgroupSmoker 12 Weeks P2...3	SubgroupSmoker 12 Weeks P2...4	SubgroupSmoker 12 Weeks P2...5	SubgroupSmoker 12 Weeks P2...6
1	Coefficients	Standard Errors	Test Statistics W	p Values	Adjusted p Values	Differential Abundance
Actinomyces sp._HMT_897 (SP1) 	-0.155584841677268	0.561041593080525	-0.277314273301903	0.781538800685257	1	FALSE
Leptotrichia buccalis (SP10) 	-0.0116593036876275	0.336271321831038	-0.0346723105144416	0.972341040655285	1	FALSE
Capnocytophaga endodontalis (SP101) 	-1.76525502446485	0.768490541143029	-2.29704196728208	0.0216163757805018	1	FALSE
Prevotella veroralis (SP102) 	0.0347784042918327	0.627428266677096	0.0554300884083874	0.955795825595173	1	FALSE
Selenomonas artemidis (SP103) 	0.00775873321823556	0.283981993304369	0.027321215433261	0.978203535714642	1	FALSE
Alloprevotella sp._HMT_913 (SP105) 	0.0522720232174378	0.257167975144636	0.203260235602971	0	0	TRUE
Filifactor alocis (SP107) 	0.391781231773766	0.464147744359871	0.844087333256549	0.398620605369227	1	FALSE
Actinomyces israelii (SP109) 	-0.769126747992256	0.764488123624304	-1.00606762122865	0.314383042799529	1	FALSE
Prevotella pleuritidis (SP11) 	-0.00432818406381597	0.660119836757526	-0.00655666414309829	0.994768576392894	1	FALSE
Prevotella oulorum (SP111) 	0.250767080463421	0.623872207166161	0.401952639631904	0.687718881460519	1	FALSE
Parvimonas sp._HMT_110 (SP112) 	0.0897090448546787	0.59481148261045	0.150819288929952	0.88011826995059	1	FALSE
Treponema sp._HMT_231 (SP114) 	-0.0652210967060877	0.487334844645538	-0.133832204741129	0.893535260566362	1	FALSE
Streptococcus oralis_subsp._tigurinus_clade_070 (SP117) 	1.03298035438628	0.667418536067176	1.54772500097646	0.121688520120902	1	FALSE
Prevotella sp._HMT_317 (SP118) 	0.432761497948527	0.629638309068963	0.687317610309393	0.491882603815101	1	FALSE
Prevotella loescheii (SP119) 	0.454797685910567	0.331916803656211	1.37021591224297	0	0	TRUE
Streptococcus oralis (SP12) 	0.356934953597675	0.908390287608196	0.392931274658924	0.694370241741779	1	FALSE
Treponema sp._HMT_257 (SP120) 	-0.322479029451806	0.370531537099075	-0.870314661948949	0.384128468495195	1	FALSE
Schaalia sp._HMT_180 (SP121) 	-0.228702766857609	0.747982601566406	-0.3057594740555	0.759787786603717	1	FALSE
Schaalia sp._HMT_178 (SP122) 	0.209015154746681	0.326299132880944	0.640563010086036	0.521806638675143	1	FALSE
Streptococcus cristatus (SP123) 	-1.98787576150608	0.821574675669471	-2.41959230289837	0.0155379167828664	1	FALSE
Prevotella salivae (SP124) 	-0.60948838076434	0.666928052718182	-0.913874260169839	0.360782920210195	1	FALSE
Saccharibacteria_(TM7)_[G-1] bacterium_HMT_349 (SP125) 	-0.109370640811527	0.597588912777224	-0.183019862773624	0.854782433606092	1	FALSE
Selenomonas sp._HMT_134 (SP127) 	0.0344259009824534	0.263394159250698	0.130701079630574	0	0	TRUE
Prevotella maculosa (SP129) 	-0.336995931927492	0.518488635021713	-0.649958184548018	0.515719232449192	1	FALSE
Selenomonas sputigena (SP13) 	0.0816492808140556	0.681357519137735	0.119833242491231	0.904615247978719	1	FALSE
Lautropia mirabilis (SP131) 	0.179225384661898	0.742759644849167	0.241296610424081	0.809325237780856	1	FALSE
Porphyromonas endodontalis (SP132) 	0.419099313556777	0.649947321068631	0.644820433858704	0.5190435583742	1	FALSE
Saccharibacteria_(TM7)_[G-1] bacterium_HMT_346 (SP135) 	0.540756552582381	0.584000536974328	0.925952149605903	0.354470848009062	1	FALSE
Olsenella sp._HMT_807 (SP136) 	1.50080447094826	0.493389024594537	3.04182783997193	0.00235146343209321	0.38799146629538	FALSE
Actinomyces sp._HMT_525 (SP137) 	-0.129659771750724	0.456070729912699	-0.284297507484296	0.776182396114251	1	FALSE
Bacteroidales_[G-2] bacterium_HMT_274 (SP14) 	-0.487694251484992	0.576060150701112	-0.846602999515638	0.397216441479238	1	FALSE
Capnocytophaga sp._HMT_864 (SP140) 	0.275449411349817	0.28232334793819	0.975652256044097	0	0	TRUE
Schaalia odontolytica (SP141) 	-0.300428779295986	0.579396078213948	-0.518520560619068	0.604095118549067	1	FALSE
Actinomyces viscosus (SP146) 	-0.2608773625499	0.452483821536304	-0.576545171635421	0.564246746607951	1	FALSE
Streptococcus intermedius (SP147) 	-0.793058266031087	0.964383566545098	-0.82234734554034	0.410879237781505	1	FALSE
Campylobacter gracilis (SP151) 	0.332022639148625	0.760788517052892	0.436419099009012	0.66253268434886	1	FALSE
Actinomyces sp._HMT_448 (SP153) 	-1.49314999884043	1.06753831496963	-1.39868515996347	0.161907416298456	1	FALSE
Streptococcus gordonii (SP155) 	-0.442280246672083	1.00661137364847	-0.43937537191641	0.660389568700544	1	FALSE
Peptoanaerobacter [Eubacterium] yurii (SP157) 	-0.220557709876095	0.372441069137281	-0.592194921969784	0.553720069464887	1	FALSE
Selenomonas noxia (SP161) 	-0.249676307547677	0.720423182377951	-0.346568952325428	0.728915174327465	1	FALSE
Clostridiales_[F-1][G-1] bacterium_HMT_093 (SP162) 	-0.161744701029466	0.389009894206173	-0.415785571108744	0.677566918083552	1	FALSE
Mogibacterium timidum (SP165) 	0.557962515392246	0.493265683798494	1.13116021186704	0.257987665165239	1	FALSE
Saccharibacteria_(TM7)_[G-1] bacterium_HMT_957 (SP166) 	0.327294922609652	0.289774408457016	1.12948180742538	0	0	TRUE
Leptotrichia hongkongensis (SP167) 	-1.9586033615146	0.833884443755503	-2.34877071539287	0.0188355014338987	1	FALSE
Prevotella sp._HMT_314 (SP17) 	0.187888256044356	0.283149003817836	0.663566721093725	0	0	TRUE
Capnocytophaga ochracea (SP172) 	-0.320023989611007	0.528354516747482	-0.605699354253759	0.544714412906989	1	FALSE
Actinomyces oris (SP173) 	-0.0943964996643706	0.898847215888777	-0.105019516104338	0.916360322740398	1	FALSE
Actinomyces naeslundii (SP179) 	0.433135429876714	0.332427057571921	1.3029487823295	0	0	TRUE
Treponema sp._HMT_237 (SP18) 	0.653511898841742	0.303638996296767	2.15226603569398	0	0	TRUE
Streptococcus anginosus (SP180) 	0.276370873610894	0.669479390416548	0.41281461022861	0.679742446291528	1	FALSE
Saccharibacteria_(TM7)_[G-1] bacterium_HMT_347 (SP183) 	-0.0012331003769302	0.523785942093077	-0.00235420670513351	0.998121616552126	1	FALSE
Oribacterium sp._HMT_078 (SP186) 	-0.391138211250747	0.640995985242956	-0.610203839424196	0.541726786742113	1	FALSE
Actinomyces sp._HMT_171 (SP189) 	-0.440493093176622	0.551675221324532	-0.79846452432471	0.424600972107167	1	FALSE
Catonella morbi (SP19) 	0.737222451029476	0.370978080678771	1.98723991908254	0.0468958160897866	1	FALSE
Actinomyces sp._HMT_175 (SP190) 	0.342693885201463	0.808020395519645	0.424115390034274	0.671481662173798	1	FALSE
Schaalia georgiae (SP191) 	-0.784268732896598	0.532975761917865	-1.4714904296482	0.141158533820182	1	FALSE
Leptotrichia sp._HMT_212 (SP192) 	-0.274582666628148	0.315709964708055	-0.869730757095554	0.384447559688273	1	FALSE
Tannerella forsythia (SP193) 	0.216906504783064	0.509307848995947	0.425884865530101	0.670191743518107	1	FALSE
Bergeyella sp._HMT_900 (SP196) 	-0.419797906104908	0.440291069491804	-0.953455418910609	0.340359373787874	1	FALSE
Alloprevotella rava (SP199) 	0.386557045176367	0.293646327895466	1.31640347061985	0	0	TRUE
Granulicatella adiacens (SP2) 	-0.852566928776595	0.817288470776325	-1.04316524613	0.296871766493798	1	FALSE
Treponema maltophilum (SP203) 	0.058017760664924	0.258522443244828	0.224420595506981	0	0	TRUE
Peptostreptococcus stomatis (SP208) 	0.593113028400629	0.37585532603295	1.57803544959912	0.11455746605482	1	FALSE
Tannerella sp._HMT_286 (SP212) 	-0.73795286316401	0.467665485711724	-1.5779502351792	0.114577042921737	1	FALSE
Capnocytophaga sputigena (SP216) 	-0.211994685334305	0.559695683656264	-0.378767768851512	0.70486032384752	1	FALSE
Actinomyces sp._HMT_169 (SP22) 	-0.554987711940537	0.88272922947897	-0.628717950427583	0.52953372422553	1	FALSE
Streptococcus constellatus (SP222) 	-0.202008354046834	0.469799479936244	-0.429988458212529	0.667204037021901	1	FALSE
Prevotella melaninogenica (SP223) 	-0.505632830876845	0.674765073289952	-0.749346477599278	0.453648401316623	1	FALSE
Lachnoanaerobaculum orale (SP224) 	-0.458381744299986	0.507419209831486	-0.903359067647862	0.366335356713882	1	FALSE
Campylobacter sp._HMT_044 (SP228) 	0.17550146179325	0.285942932216185	0.613763943850739	0	0	TRUE
Veillonellaceae_[G-1] bacterium_HMT_155 (SP229) 	-0.173554169242575	0.384989320020466	-0.450802555336726	0.652131859445989	1	FALSE
Kingella oralis (SP232) 	-0.820923086999667	0.821435726003345	-0.99937592317031	0.317612618748974	1	FALSE
Arachnia propionica (SP235) 	-0.975087201137455	0.635462458880215	-1.53445288153719	0.12491827655994	1	FALSE
Scardovia wiggsiae (SP236) 	-0.301050055330017	0.795184881844571	-0.37859127129238	0.7049914049984	1	FALSE
Gemella sanguinis (SP237) 	-0.895441482293105	0.548098531580219	-1.6337235564406	0.102316909796003	1	FALSE
Alloprevotella sp._HMT_473 (SP238) 	-0.527136991466752	0.539055874034972	-0.977889337372386	0.328129059280272	1	FALSE
Porphyromonas catoniae (SP24) 	0.420352455763863	0.301133090601124	1.39590257226382	0	0	TRUE
Dialister invisus (SP25) 	0.641356818182053	0.715041445062683	0.896950551063274	0.369745303903933	1	FALSE
Peptidiphaga sp._HMT_183 (SP251) 	-1.33454880480759	0.729861923090528	-1.82849490100343	0.067475310238507	1	FALSE
Actinomyces massiliensis (SP253) 	-0.641587462299973	0.601504188630722	-1.06663839492207	0.28613515565593	1	FALSE
Selenomonas dianae (SP255) 	-0.170697125910169	0.326048147485079	-0.523533494138256	0.600603048912854	1	FALSE
Cardiobacterium hominis (SP257) 	-0.71166528651889	0.598554156803423	-1.18897392730432	0.234449926924735	1	FALSE
Saccharibacteria_(TM7)_[G-5] bacterium_HMT_356 (SP26) 	0.710667866926537	0.520380438334065	1.36566983417296	0.172042616638096	1	FALSE
Fretibacterium sp._HMT_360 (SP260) 	-0.251375481535916	0.468462678565495	-0.536596602114957	0.591546291725901	1	FALSE
Treponema lecithinolyticum (SP264) 	-0.336604255376913	0.433635097766434	-0.776238494325512	0.437608181194709	1	FALSE
Mycoplasma faucium (SP271) 	-0.0188981060748565	0.250321740562783	-0.0754952647435621	0	0	TRUE
Peptidiphaga gingivicola (SP286) 	0.446054662810093	0.337542922715338	1.32147538221759	0	0	TRUE
Peptostreptococcaceae_[XI][G-9] [Eubacterium]_brachy (SP292) 	0.857589577662066	0.732581010385721	1.17064128813621	0.241742993936427	1	FALSE
Neisseria elongata (SP295) 	-0.333711219011606	0.444442668788739	-0.750853242604013	0.452740982633656	1	FALSE
Mogibacterium neglectum (SP298) 	-0.331875757735189	0.494399329031281	-0.671270647525881	0.502048129990185	1	FALSE
Stomatobaculum longum (SP3) 	-0.493254570140179	0.638079415764363	-0.773030061703688	0.439504589784507	1	FALSE
Mitsuokella sp._HMT_521 (SP300) 	0.0526473600742099	0.26867824370815	0.195949472304121	0	0	TRUE
Bacteroidetes_[G-3] bacterium_HMT_365 (SP309) 	0.134499321569754	0.268537012866775	0.500859528203963	0	0	TRUE
Porphyromonas pasteri (SP31) 	-1.86816982777344	0.730639082416663	-2.5568983000393	0.0105610088799051	1	FALSE
Bulleidia extructa (SP316) 	0.349305847116571	0.289706529979225	1.20572307134955	0	0	TRUE
Treponema sp._HMT_268 (SP317) 	0.00620571349656412	0.249032822937165	0.0249192593304455	0	0	TRUE
Neisseria sicca (SP318) 	-0.433544308415064	0.668925049694676	-0.648120904745533	0.516906754125198	1	FALSE
Prevotella oris (SP32) 	-0.12905272264056	0.873209579996714	-0.147791235456951	0.882507526470702	1	FALSE
Megasphaera micronuciformis (SP320) 	0.0286876804424078	0.53023410913937	0.054103800468384	0.956852464348745	1	FALSE
Shuttleworthia satelles (SP326) 	-0.0871274732341613	0.445609716423512	-0.19552417737533	0.844982612118634	1	FALSE
Actinomyces dentalis (SP346) 	1.06423236857313	0.382877242140306	2.77956548846833	0	0	TRUE
Peptostreptococcaceae_[XI][G-6] [Eubacterium]_nodatum (SP351) 	0.203090190066495	0.292302056533464	0.694795625029222	0	0	TRUE
Veillonellaceae_[G-1] bacterium_HMT_132 (SP352) 	-0.204240591126485	0.332026450807442	-0.615133495026677	0.538466563425448	1	FALSE
Gemella haemolysans (SP354) 	-2.09026928198536	0.783892491780823	-2.66652545330133	0.00766398027231989	1	FALSE
Haemophilus haemolyticus (SP357) 	-0.548333280572368	0.561734352563464	-0.976143399580354	0.328993407099517	1	FALSE
Alloprevotella tannerae (SP36) 	-0.0171610685207108	0.661387774425758	-0.0259470603846747	0.979299563908142	1	FALSE
Streptococcus parasanguinis_clade_411 (SP37) 	0.0233970675951387	0.868452632999328	0.0269410981164666	0.978506713845984	1	FALSE
Solobacterium moorei (SP371) 	0.599286236131676	0.314439139642611	1.90588944115806	0	0	TRUE
Veillonellaceae_[G-1] bacterium_HMT_150 (SP382) 	0.321892601481183	0.300104728981839	1.07260089693775	0	0	TRUE
Streptococcus vestibularis (SP39) 	-0.54261199543204	0.625304451898082	-0.867756488515262	0.385527654533684	1	FALSE
Streptococcus mutans (SP4) 	-2.90618983239821	1.1839680312668	-2.45461849952883	0.0141034172900178	1	FALSE
Prevotella oralis (SP405) 	-0.81168269829653	0.524917638200843	-1.54630486618544	0.122030957303162	1	FALSE
Rothia mucilaginosa (SP41) 	0.741886336689447	0.592770601976364	1.25155723683987	0.210731245087126	1	FALSE
Lancefieldella rimae (SP42) 	0.568743002397118	0.807314194366035	0.704487802105026	0.481129043742972	1	FALSE
Fusobacterium nucleatum (SP43) 	1.00195759720676	0.796987534286783	1.25718101488677	0.208688096303061	1	FALSE
Campylobacter concisus (SP44) 	0.749972408967056	0.468741836076675	1.59996900478151	0.109605459600629	1	FALSE
Capnocytophaga sp._HMT_380 (SP45) 	-0.481456722575285	0.452360054674953	-1.06432192144207	0.287182890635006	1	FALSE
Campylobacter showae (SP46) 	0.430037305837544	0.501724376376216	0.857118621470132	0.391379330846039	1	FALSE
Peptococcus sp._HMT_167 (SP47) 	0.0644397045273583	0.451487083223194	0.142727681304456	0.886505254011444	1	FALSE
Eikenella corrodens (SP48) 	-0.681934587474014	0.562465298159085	-1.21240295126819	0.2253581717502	1	FALSE
Actinomyces sp._HMT_170 (SP49) 	0.467891720854243	0.409413034467142	1.14283542892867	0.253106925965746	1	FALSE
Schaalia meyeri (SP51) 	0.615477006421754	0.339213256690019	1.81442497981201	0	0	TRUE
Veillonella parvula (SP52) 	-1.1703239987683	0.765180605445724	-1.52947420574856	0.12614692881212	1	FALSE
Streptococcus mitis (SP57) 	0.124376650714116	0.874512363785264	0.142224004902299	0.886903071352041	1	FALSE
Fusobacterium nucleatum_subsp._vincentii (SP58) 	0.216015060555584	0.585514976980241	0.368931742224031	0.712178602849138	1	FALSE
Prevotella denticola (SP59) 	-0.44560603265102	0.882185785068371	-0.505115861299539	0.613477461582181	1	FALSE
Corynebacterium matruchotii (SP6) 	-0.656404842565657	0.927224263687464	-0.707924574746579	0.478992097852293	1	FALSE
Lachnospiraceae_[G-3] bacterium_HMT_100 (SP60) 	-0.263540038867254	0.484904050214279	-0.543489044380627	0.586793131976717	1	FALSE
Rothia aeria (SP61) 	-1.321431782892	0.705629868486111	-1.87269819760757	0.0611100724062713	1	FALSE
Leptotrichia sp._HMT_215 (SP62) 	-0.816318325022675	0.569842099373902	-1.43253425101371	0.1519909831101	1	FALSE
Haemophilus parainfluenzae (SP63) 	-0.587643990051752	0.977259144950683	-0.601318486593858	0.547627878887608	1	FALSE
Prevotella multiformis (SP64) 	-0.239756190398174	0.371649108691321	-0.645114396325131	0.518853055123977	1	FALSE
Fretibacterium fastidiosum (SP65) 	0.642221803119367	0.328012390946553	1.95791933733385	0	0	TRUE
Rothia dentocariosa (SP66) 	-1.11404125934283	0.913375195503116	-1.21969729945336	0.222579645719873	1	FALSE
Lachnoanaerobaculum saburreum (SP67) 	-0.210877430238747	0.659505666868096	-0.319750747920296	0.749157286380754	1	FALSE
Aggregatibacter sp._HMT_458 (SP68) 	-1.07373333887816	0.682712923751123	-1.57274500236292	0.115777874970576	1	FALSE
Prevotella sp._HMT_300 (SP69) 	0.296437779500021	0.501149073992601	0.591516167311919	0.554174625809129	1	FALSE
Streptococcus sanguinis (SP7) 	-0.963610692755445	0.917354711549916	-1.05042322301629	0.293523573160014	1	FALSE
Bergeyella sp._HMT_322 (SP70) 	0.0194598399655856	0.628083002620362	0.030982911310128	0.975283167929407	1	FALSE
Treponema socranskii (SP72) 	0.43609994510905	0.593903429847345	0.734294370418341	0.462769348209975	1	FALSE
Prevotella intermedia (SP73) 	0.722044298233784	0.352142093878409	2.05043450012284	0	0	TRUE
Gemella morbillorum (SP77) 	0.272324907166627	0.586050368982675	0.464678330702795	0.642161828482737	1	FALSE
Anaeroglobus geminatus (SP79) 	0.52216520762385	0.328845736276275	1.58787282309527	0	0	TRUE
Capnocytophaga granulosa (SP8) 	-0.397516793554521	0.565012864873715	-0.703553526419915	0.481710861718451	1	FALSE
Capnocytophaga gingivalis (SP82) 	-0.393771925266045	0.682534411689594	-0.576926113206914	0.563989369424101	1	FALSE
Saccharibacteria_(TM7)_[G-3] bacterium_HMT_351 (SP83) 	-0.402836368973658	0.330389208220136	-1.21927822989076	0.22273860854545	1	FALSE
Treponema denticola (SP84) 	0.46858767283523	0.316355425658633	1.48120637368447	0	0	TRUE
Leptotrichia wadei (SP85) 	1.45577886043315	0.737725924396195	1.97333293068786	0.048457643424125	1	FALSE
Porphyromonas gingivalis (SP86) 	-0.531185681717111	0.51191414960267	-1.03764602351664	0.299434882809443	1	FALSE
Streptococcus salivarius (SP87) 	-1.77269135061227	0.794173118578509	-2.23212207658856	0.0256068957121822	1	FALSE
Streptococcus sp._HMT_064 (SP9) 	-0.419840125511164	0.738190537889342	-0.568742220283105	0.569531091109853	1	FALSE
Capnocytophaga leadbetteri (SP92) 	0.446346731836754	0.533616928031199	0.836455345379631	0.402898788074323	1	FALSE
Parvimonas micra (SP93) 	0.904318827554321	0.849429091110486	1.06461956273722	0.287048123451721	1	FALSE
Bifidobacterium dentium (SP95) 	-0.455933756496527	0.56596887096996	-0.805580977828596	0.420484497390231	1	FALSE
Corynebacterium durum (SP96) 	-1.37297544677839	0.759902372814056	-1.80677873355496	0.0707967858374367	1	FALSE
Lancefieldella parvula (SP97) 	-1.78583678614112	0.933936246410193	-1.91216134185327	0.055855502866708	1	FALSE
Actinomyces naeslundii_nov_97.422% (SPN109) 	-0.0703982319396483	0.708397841767495	-0.0993766889012542	0.920839190693524	1	FALSE
Actinomyces sp._HMT_175_nov_97.633% (SPN133) 	-1.99891819022794	0.814333774394643	-2.45466693520589	0.0141015173736194	1	FALSE
Streptococcus sanguinis_nov_97.727% (SPN14) 	-0.0158066276954639	0.476244106384566	-0.033190180169285	0.973522928899449	1	FALSE
Actinomyces viscosus_nov_95.849% (SPN249) 	0.145276266723081	0.574997205677381	0.252655604738004	0.800534357248664	1	FALSE
Marseilla massiliensis_nov_77.473% (SPN44) 	-0.369475344492667	0.427135209708137	-0.865007932137298	0.387034435134076	1	FALSE
Actinomyces viscosus_nov_95.841% (SPN468) 	0.0454651734609448	0.263090542684417	0.172811888245946	0	0	TRUE
Prevotella veroralis_nov_96.402% (SPN608) 	0.0309380468945374	0.266767943139554	0.115973630603557	0	0	TRUE
Veillonella dispar_parvula (SPP13) 	-0.995392417136061	0.729130841440482	-1.36517667414747	0.172197527836826	1	FALSE
Streptococcus infantis_infantis_clade_638 (SPP16) 	-1.46421472720096	0.567515230273519	-2.58004481482421	0.00987874942777232	1	FALSE
